RRepoGEO

REPOGEO REPORT · LITE

oschwengers/bakta

Default branch main · commit 33bf16ae · scanned 5/29/2026, 4:22:23 AM

GitHub: 644 stars · 79 forks

AI VISIBILITY SCORE
78 /100
Needs work
Category recall
2 / 2
Avg rank #4.0 when recommended
Rule findings
1 pass · 1 warn · 0 fail
Objective metadata checks
AI knows your name
3 / 3
Direct prompts that named your repo
HOW TO READ THIS REPORT

Action plan is what to do next — copy-pasteable changes prioritized by impact. Category visibility is the real GEO test: when a user asks an AI a brand-free question that should surface oschwengers/bakta, does the AI actually recommend you — or your competitors? Objective checks verify the metadata signals AI engines weight first. Self-mention check detects whether AI even knows you exist by name.

Action plan — copy-paste fixes

3 prioritized changes generated by gemini-2.5-flash. Mark items done after you ship the fix.

OVERALL DIRECTION
  • highhomepage#1
    Add project homepage URL to About section

    Why:

    COPY-PASTE FIX
    https://github.com/oschwengers/bakta
  • mediumreadme#2
    Emphasize unique annotation details in the README's opening paragraph

    Why:

    CURRENT
    Bakta is a tool for the rapid & standardized annotation of bacterial genomes and plasmids from both isolates and MAGs. It provides **dbxrefrich, **sORFincluding and taxon-independent annotations in machine-readable `JSON` & bioinformatics standard file formats for automated downstream analysis.
    COPY-PASTE FIX
    Bakta is a tool for the rapid & standardized annotation of bacterial genomes and plasmids from both isolates and MAGs. It provides **dbxrefrich, **sORFincluding and taxon-independent annotations, including detailed identification of antibiotic resistance genes (ARGs), virulence factors (VFs), and mobile genetic elements, in machine-readable `JSON` & bioinformatics standard file formats for automated downstream analysis.
  • mediumtopics#3
    Add specific differentiator keywords to repository topics

    Why:

    CURRENT
    annotation, bacteria, bacterial-genomes, bioinformatics, genome-annotation, mag, metagenome-assembled-genomes, microbial-genomics, plasmids
    COPY-PASTE FIX
    annotation, antibiotic-resistance, bacteria, bacterial-genomes, bioinformatics, genome-annotation, genomics, mag, metagenome-assembled-genomes, microbial-genomics, mobile-genetic-elements, plasmids, prokaryotic-annotation, virulence-factors

Category GEO backends resolved for this scan: google/gemini-2.5-flash, deepseek/deepseek-v4-flash

Category visibility — the real GEO test

Brand-free queries asked to google/gemini-2.5-flash. Did AI recommend you, or someone else?

Same questions for every model — switch tabs to compare answers and rankings.

Recall
2 / 2
100% of queries surface oschwengers/bakta
Avg rank
#4.0
Lower is better. #1 = top recommendation.
Share of voice
14%
Of all named tools, what % are you?
Top rival
tseemann/prokka
Recommended in 1 of 2 queries
COMPETITOR LEADERBOARD
  1. tseemann/prokka · recommended 1×
  2. PGAP (NCBI Prokaryotic Genome Annotation Pipeline) · recommended 1×
  3. theSEED/RASTtk · recommended 1×
  4. DDBJ/DFAST · recommended 1×
  5. GeneMarkS-2 · recommended 1×
  • CATEGORY QUERY
    What tools can rapidly annotate bacterial genomes and plasmids for downstream analysis?
    you: #5
    AI recommended (in order):
    1. Prokka (tseemann/prokka)
    2. PGAP (NCBI Prokaryotic Genome Annotation Pipeline)
    3. RAST (Rapid Annotation using Subsystem Technology) (theSEED/RASTtk)
    4. DFAST (DNA Data Bank of Japan (DDBJ) Fast Annotation and Submission Tool) (DDBJ/DFAST)
    5. Bakta (oschwengers/bakta) ← you
    6. GeneMarkS-2
    7. MAKER (dwyerlab/MAKER)
    Show full AI answer
  • CATEGORY QUERY
    How to standardize annotation for metagenome-assembled genomes and microbial plasmids?
    you: #3
    AI recommended (in order):
    1. Prokka
    2. DRAM
    3. Bakta ← you
    4. PGAP
    5. RAST
    6. dbCAN2
    7. PlasmidFinder
    Show full AI answer

Objective checks

Rule-based audits of metadata signals AI engines weight most.

  • Metadata completeness
    warn

    Suggestion:

  • README presence
    pass

Self-mention check

Does AI even know your repo exists when asked about it directly?

  • Compared to common alternatives in this category, what is the core differentiator of oschwengers/bakta?
    pass
    AI named oschwengers/bakta explicitly

    AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?

  • If a team adopts oschwengers/bakta in production, what risks or prerequisites should they evaluate first?
    pass
    AI named oschwengers/bakta explicitly

    AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?

  • In one sentence, what problem does the repo oschwengers/bakta solve, and who is the primary audience?
    pass
    AI named oschwengers/bakta explicitly

    AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?

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MARKDOWN (README)
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  • Brand-free category queries5 vs 2 in Lite
  • Prioritized action items8 vs 3 in Lite