RRepoGEO

REPOGEO REPORT · LITE

instadeepai/nucleotide-transformer

Default branch main · commit 2dc37b86 · scanned 6/11/2026, 1:07:53 AM

GitHub: 882 stars · 95 forks

Scan history for this repo

Score trend below includes all ready runs (older left, newer right; scroll horizontally if needed). The table is collapsed by default—expand for newest-first rows, 10 per page.

Score trend (left → right: older → newer)

2 ready scans. Expand the table below for newest-first rows (10 per page, paginated).

AI VISIBILITY SCORE
28 /100
Critical
Category recall
0 / 2
Not recommended in any query
Rule findings
1 pass · 1 warn · 0 fail
Objective metadata checks
AI knows your name
2 / 3
Direct prompts that named your repo
HOW TO READ THIS REPORT

Action plan is what to do next — copy-pasteable changes prioritized by impact. Category visibility is the real GEO test: when a user asks an AI a brand-free question that should surface instadeepai/nucleotide-transformer, does the AI actually recommend you — or your competitors? Objective checks verify the metadata signals AI engines weight first. Self-mention check detects whether AI even knows you exist by name.

Action plan — copy-paste fixes

3 prioritized changes generated by gemini-2.5-flash. Mark items done after you ship the fix.

OVERALL DIRECTION
  • highreadme#1
    Emphasize pre-training scale in README's opening statement

    Why:

    CURRENT
    A hub for InstaDeep's cutting-edge deep learning models and research for genomics, originating from the Nucleotide Transformer and its evolutions.
    COPY-PASTE FIX
    A hub for InstaDeep's cutting-edge deep learning models and research for genomics, originating from the Nucleotide Transformer and its evolutions, notably pre-trained on an unprecedented 2.8 trillion nucleotides.
  • mediumhomepage#2
    Add a homepage URL to the repository metadata

    Why:

    COPY-PASTE FIX
    Add the official project or research page URL to the repository's 'About' section.
  • lowreadme#3
    Clarify the repository's license in the README

    Why:

    COPY-PASTE FIX
    Add a section or line in the README, e.g., 'This project is licensed under [License Name(s) from LICENSE file]. Please see the [LICENSE file link] for full details.'

Category GEO backends resolved for this scan: google/gemini-2.5-flash, deepseek/deepseek-v4-flash

Category visibility — the real GEO test

Brand-free queries asked to google/gemini-2.5-flash. Did AI recommend you, or someone else?

Same questions for every model — switch tabs to compare answers and rankings.

Recall
0 / 2
0% of queries surface instadeepai/nucleotide-transformer
Avg rank
—
Lower is better. #1 = top recommendation.
Share of voice
0%
Of all named tools, what % are you?
Top rival
Enformer
Recommended in 1 of 2 queries
COMPETITOR LEADERBOARD
  1. Enformer · recommended 1×
  2. GenomicBERT · recommended 1×
  3. DNABERT · recommended 1×
  4. HyenaDNA · recommended 1×
  5. SpliceAI · recommended 1×
  • CATEGORY QUERY
    What are the best deep learning foundation models for genomic sequence analysis?
    you: not recommended
    Show full AI answer
  • CATEGORY QUERY
    Seeking transformer-based AI tools to interpret complex transcriptomic and DNA data.
    you: not recommended
    AI recommended (in order):
    1. Enformer
    2. GenomicBERT
    3. DNABERT
    4. HyenaDNA
    5. SpliceAI
    6. DeepBind

    AI recommended 6 alternatives but never named instadeepai/nucleotide-transformer. This is the gap to close.

    Show full AI answer

Objective checks

Rule-based audits of metadata signals AI engines weight most.

  • Metadata completeness
    warn

    Suggestion:

  • README presence
    pass

Self-mention check

Does AI even know your repo exists when asked about it directly?

  • Compared to common alternatives in this category, what is the core differentiator of instadeepai/nucleotide-transformer?
    pass
    AI did not name instadeepai/nucleotide-transformer — likely talking about a different project

    AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?

  • If a team adopts instadeepai/nucleotide-transformer in production, what risks or prerequisites should they evaluate first?
    pass
    AI named instadeepai/nucleotide-transformer explicitly

    AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?

  • In one sentence, what problem does the repo instadeepai/nucleotide-transformer solve, and who is the primary audience?
    pass
    AI named instadeepai/nucleotide-transformer explicitly

    AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?

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instadeepai/nucleotide-transformer — Lite scans stay free; this card itemizes Pro deep limits vs Lite.

  • Deep reports10 / month
  • Brand-free category queries5 vs 2 in Lite
  • Prioritized action items8 vs 3 in Lite