REPOGEO REPORT · LITE
ChrisHayduk/minAlphaFold2
Default branch main · commit c382fe70 · scanned 6/9/2026, 5:53:00 AM
GitHub: 620 stars · 74 forks
Action plan is what to do next — copy-pasteable changes prioritized by impact. Category visibility is the real GEO test: when a user asks an AI a brand-free question that should surface ChrisHayduk/minAlphaFold2, does the AI actually recommend you — or your competitors? Objective checks verify the metadata signals AI engines weight first. Self-mention check detects whether AI even knows you exist by name.
Action plan — copy-paste fixes
2 prioritized changes generated by gemini-2.5-flash. Mark items done after you ship the fix.
- highreadme#1Strengthen README's opening sentence for pedagogical positioning
Why:
CURRENTA minimal, pedagogical PyTorch reimplementation of AlphaFold2 — the model architecture in ~3,000 lines of pure PyTorch, ~9,000 across the whole package including losses, data pipeline, and training loop.
COPY-PASTE FIXA minimal, pedagogical PyTorch reimplementation of AlphaFold2 designed for learning and understanding the model architecture, presented in ~3,000 lines of pure PyTorch.
- mediumhomepage#2Add a homepage link
Why:
COPY-PASTE FIXhttps://github.com/ChrisHayduk/minAlphaFold2
Category GEO backends resolved for this scan: google/gemini-2.5-flash, deepseek/deepseek-v4-flash
Category visibility — the real GEO test
Brand-free queries asked to google/gemini-2.5-flash. Did AI recommend you, or someone else?
Same questions for every model — switch tabs to compare answers and rankings.
- OpenFold · recommended 1×
- EquiFold · recommended 1×
- ProteinMPNN · recommended 1×
- AlphaFold 2 · recommended 1×
- RosettaFold · recommended 1×
- CATEGORY QUERYLooking for a simplified PyTorch implementation to learn complex protein folding models.you: not recommendedAI recommended (in order):
- OpenFold
- EquiFold
- ProteinMPNN
- AlphaFold 2
- RosettaFold
- PyTorch Geometric
AI recommended 6 alternatives but never named ChrisHayduk/minAlphaFold2. This is the gap to close.
Show full AI answer
- CATEGORY QUERYWhere can I find a minimal deep learning model for understanding protein structure prediction?you: not recommendedAI recommended (in order):
- OpenFold (openfold/openfold)
- RoseTTAFold
- AlphaFold-Colab / AlphaFold-Notebooks
- DeepMind's AlphaFold2 GitHub Repository (deepmind/alphafold)
- PyTorch Geometric (PyG)
- Keras
- TensorFlow
AI recommended 7 alternatives but never named ChrisHayduk/minAlphaFold2. This is the gap to close.
Show full AI answer
Objective checks
Rule-based audits of metadata signals AI engines weight most.
- Metadata completenesswarn
Suggestion:
- README presencepass
Self-mention check
Does AI even know your repo exists when asked about it directly?
- Compared to common alternatives in this category, what is the core differentiator of ChrisHayduk/minAlphaFold2?passAI named ChrisHayduk/minAlphaFold2 explicitly
AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?
- If a team adopts ChrisHayduk/minAlphaFold2 in production, what risks or prerequisites should they evaluate first?passAI did not name ChrisHayduk/minAlphaFold2 — likely talking about a different project
AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?
- In one sentence, what problem does the repo ChrisHayduk/minAlphaFold2 solve, and who is the primary audience?passAI named ChrisHayduk/minAlphaFold2 explicitly
AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?
Embed your GEO score
Drop this badge into the README of ChrisHayduk/minAlphaFold2. It auto-updates whenever the report is rescanned and links back to the latest report — easy public proof that you care about AI discoverability.
[](https://repogeo.com/en/r/ChrisHayduk/minAlphaFold2)<a href="https://repogeo.com/en/r/ChrisHayduk/minAlphaFold2"><img src="https://repogeo.com/badge/ChrisHayduk/minAlphaFold2.svg" alt="RepoGEO" /></a>Subscribe to Pro for deep diagnoses
ChrisHayduk/minAlphaFold2 — Lite scans stay free; this card itemizes Pro deep limits vs Lite.
- Deep reports10 / month
- Brand-free category queries5 vs 2 in Lite
- Prioritized action items8 vs 3 in Lite