RRepoGEO

REPOGEO REPORT · LITE

RosettaCommons/RFdiffusion

Default branch main · commit 2d0c003d · scanned 5/8/2026, 5:47:16 PM

GitHub: 2,860 stars · 611 forks

AI VISIBILITY SCORE
81 /100
Healthy
Category recall
2 / 2
Avg rank #3.0 when recommended
Rule findings
1 pass · 1 warn · 0 fail
Objective metadata checks
AI knows your name
3 / 3
Direct prompts that named your repo
HOW TO READ THIS REPORT

Action plan is what to do next — copy-pasteable changes prioritized by impact. Category visibility is the real GEO test: when a user asks an AI a brand-free question that should surface RosettaCommons/RFdiffusion, does the AI actually recommend you — or your competitors? Objective checks verify the metadata signals AI engines weight first. Self-mention check detects whether AI even knows you exist by name.

Action plan — copy-paste fixes

3 prioritized changes generated by gemini-2.5-flash. Mark items done after you ship the fix.

OVERALL DIRECTION
  • hightopics#1
    Add relevant topics to the repository

    Why:

    COPY-PASTE FIX
    protein-design, diffusion-models, protein-structure-prediction, computational-biology, binder-design, rosetta, de-novo-design, generative-ai
  • mediumreadme#2
    Clarify the project's license in the README

    Why:

    COPY-PASTE FIX
    Add a section or sentence to the README: '## License
This project uses a custom license. Please refer to the `LICENSE` file in the repository for full details on the terms and conditions.'
  • lowhomepage#3
    Add the documentation URL as the repository homepage

    Why:

    COPY-PASTE FIX
    https://www.rosettacommons.org/docs/latest/rfdiffusion/RFdiffusion

Category GEO backends resolved for this scan: google/gemini-2.5-flash, deepseek/deepseek-v4-flash

Category visibility — the real GEO test

Brand-free queries asked to google/gemini-2.5-flash. Did AI recommend you, or someone else?

Same questions for every model — switch tabs to compare answers and rankings.

Recall
2 / 2
100% of queries surface RosettaCommons/RFdiffusion
Avg rank
#3.0
Lower is better. #1 = top recommendation.
Share of voice
11%
Of all named tools, what % are you?
Top rival
Rosetta
Recommended in 2 of 2 queries
COMPETITOR LEADERBOARD
  1. Rosetta · recommended 2×
  2. ProteinMPNN · recommended 2×
  3. AlphaFold/RoseTTAFold · recommended 1×
  4. Chroma · recommended 1×
  5. FrameDiff · recommended 1×
  • CATEGORY QUERY
    How can I generate novel protein structures with specific motifs or symmetries?
    you: #2
    AI recommended (in order):
    1. AlphaFold/RoseTTAFold
    2. RFdiffusion ← you
    3. Chroma
    4. FrameDiff
    5. Rosetta
    6. RosettaScripts
    7. AbinitioRelax
    8. SymmetryMover
    9. ProteinMPNN
    10. Tranception
    11. Foldit
    12. DeepMind's AlphaDesign
    Show full AI answer
  • CATEGORY QUERY
    What open-source tools are available for computational protein design and binder generation?
    you: #4
    AI recommended (in order):
    1. Rosetta
    2. AlphaFold/AlphaFold-Multimer
    3. ProteinMPNN
    4. RFdiffusion ← you
    5. ColabDesign
    6. ESMFold/ESM-2
    7. OpenMM/MDAnalysis
    Show full AI answer

Objective checks

Rule-based audits of metadata signals AI engines weight most.

  • Metadata completeness
    warn

    Suggestion:

  • README presence
    pass

Self-mention check

Does AI even know your repo exists when asked about it directly?

  • Compared to common alternatives in this category, what is the core differentiator of RosettaCommons/RFdiffusion?
    pass
    AI named RosettaCommons/RFdiffusion explicitly

    AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?

  • If a team adopts RosettaCommons/RFdiffusion in production, what risks or prerequisites should they evaluate first?
    pass
    AI named RosettaCommons/RFdiffusion explicitly

    AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?

  • In one sentence, what problem does the repo RosettaCommons/RFdiffusion solve, and who is the primary audience?
    pass
    AI named RosettaCommons/RFdiffusion explicitly

    AI answers can be confidently wrong. Read for accuracy: does it match your actual tech stack, audience, and differentiator?

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RosettaCommons/RFdiffusion — Lite scans stay free; this card itemizes Pro deep limits vs Lite.

  • Deep reports10 / month
  • Brand-free category queries5 vs 2 in Lite
  • Prioritized action items8 vs 3 in Lite